Topics tagged pathology

Topic	Replies	Views	Activity
Slide Score (WSI viewer) Software software , basic-users , web-browser , advanced-users , pathology , paid	0	293	August 29, 2021
Can any one explain in detail how to measure TTC stained brain tissue infarct volume per mm3 with ImageJ? Questions image-analysis , pathology	2	457	October 6, 2021
Can anyone recommend a pathology slide scanner and software? Questions hardware , pathology , software	4	591	September 15, 2021
Do you know of any software out there that I can use to measure reign of interest of tiff files for a scratch assay experiment? Questions cancer , image-analysis , pathology	1	533	July 27, 2021
Ilastik (Image Analysis) Software python , free , linux-os , developers , image-analysis , advanced-users , gui , file-export , mac-os , open-source , ai , pathology , windows-os , image-file	1	238	July 12, 2021
Z-Stacking to visualise Eosinophils Questions wsi , image-analysis , pathology	0	285	July 2, 2021
ANHIR : Automatic Non-rigid Histological Image Registration (50+ histological sets) Images registration , wsi , dataset , pathology , challenge	0	281	July 1, 2021
NHS digital pathology DICOM implementation Everything Else announcement , pacs , dicom , pathology	0	539	June 24, 2021
Which is the best digital pathology image analysis software program? Fun Polls software , image-analysis , open-source , pathology	0	350	May 21, 2021
HistoQC (Image Analysis) Software advanced-users , preprocessing , file-export , python , free , developers , image-analysis , open-source , quality-control , machine-learning , pathology , image-file , ai , command-line	0	382	April 29, 2021
Icy (Image Analysis) Software wsi , basic-users , python , java , free , linux-os , developers , image-analysis , advanced-users , gui , file-export , mac-os , open-source , javascript , pathology , windows-os , image-file	0	224	April 29, 2021
Orbit (Image Analysis) Software wsi , java , free , linux-os , developers , image-analysis , advanced-users , gui , file-export , mac-os , open-source , ai , pathology , windows-os , image-file	0	255	April 29, 2021
Cell profiler (Image Analysis) Software free , linux-os , developers , image-analysis , advanced-users , java , gui , file-export , mac-os , open-source , pathology , windows-os , image-file	0	205	April 29, 2021
QuPath (Image Analysis) Software free , linux-os , developers , image-analysis , advanced-users , java , gui , file-export , basic-users , mac-os , open-source , pathology , windows-os , image-file , ai , wsi	0	247	April 29, 2021
The Cancer Genome Atlas Uterine Corpus Endometrial Carcinoma data collection (65 subjects) Images uterus , pet , mri , ct , pathology , cancer , tcia , dataset	0	186	January 17, 2021
The Cancer Genome Atlas Thyroid Cancer data collection (6 subjects) Images pet , ct , thyroid , pathology , cancer , tcia , dataset	0	199	January 17, 2021
The Cancer Genome Atlas Stomach Adenocarcinoma data collection (46 subjects) Images ct , pathology , cancer , tcia , stomach , dataset	0	208	January 17, 2021
The Cancer Genome Atlas Sarcoma data collection (5 subjects) Images chest , abdomen , mri , ct , pathology , cancer , tcia , dataset	0	203	January 17, 2021
The Cancer Genome Atlas Rectum Adenocarcinoma data collection (3 subjects) Images mri , ct , pathology , tcia , rectum , dataset	0	209	January 17, 2021
The Cancer Genome Atlas Prostate Adenocarcinoma data collection (14 subjects) Images pet , prostate , mri , ct , pathology , cancer , tcia , dataset	0	217	January 17, 2021
The Cancer Genome Atlas Ovarian Cancer data collection (143 subjects) Images mri , ct , pathology , cancer , tcia , ovary , dataset	0	161	January 17, 2021
The Cancer Genome Atlas Lung Squamous Cell Carcinoma data collection (37 subjects) Images lung , pet , ct , pathology , cancer , tcia , dataset	0	210	January 16, 2021
The Cancer Genome Atlas Lung Adenocarcinoma data collection (69 subjects) Images lung , pet , ct , pathology , cancer , tcia , dataset	0	174	January 16, 2021
The Cancer Genome Atlas Liver Hepatocellular Carcinoma data collection (97 subjects) Images pet , mri , liver , ct , pathology , cancer , tcia , dataset	0	208	January 16, 2021
The Cancer Genome Atlas Low Grade Glioma data collection (199 subjects) Images brain , mri , ct , pathology , cancer , tcia , dataset	0	181	January 16, 2021
The Cancer Genome Atlas Cervical Kidney renal papillary cell carcinoma data collection (33 subjects) Images pet , kidney , mri , ct , pathology , cancer , tcia , dataset	0	191	January 16, 2021
The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma data collection (267 subjects) Images kidney , mri , ct , pathology , cancer , tcia , dataset	0	209	January 16, 2021
The Cancer Genome Atlas Kidney Chromophobe data collection (15 subjects) Images kidney , mri , ct , pathology , cancer , tcia , dataset	0	180	January 16, 2021
The Cancer Genome Atlas Head-Neck Squamous Cell Carcinoma data collection (227 subjects) Images pet , head-neck , mri , ct , rtplan , rtdose , pathology , rtstruct , cancer , tcia , dataset	0	182	January 16, 2021
The Cancer Genome Atlas Glioblastoma Multiforme data collection (262 subjects) Images brain , mri , ct , pathology , cancer , tcia , dataset	0	208	January 16, 2021

Slide Score (WSI viewer)

Software

software , basic-users , web-browser , advanced-users , pathology , paid

0

293

August 29, 2021

Can any one explain in detail how to measure TTC stained brain tissue infarct volume per mm3 with ImageJ?

Questions

image-analysis , pathology

2

457

October 6, 2021

Can anyone recommend a pathology slide scanner and software?

Questions

hardware , pathology , software

4

591

September 15, 2021

Do you know of any software out there that I can use to measure reign of interest of tiff files for a scratch assay experiment?

Questions

cancer , image-analysis , pathology

1

533

July 27, 2021

Ilastik (Image Analysis)

Software

python , free , linux-os , developers , image-analysis , advanced-users , gui , file-export , mac-os , open-source , ai , pathology , windows-os , image-file

1

238

July 12, 2021

Z-Stacking to visualise Eosinophils

Questions

wsi , image-analysis , pathology

0

285

July 2, 2021

ANHIR : Automatic Non-rigid Histological Image Registration (50+ histological sets)

Images

registration , wsi , dataset , pathology , challenge

0

281

July 1, 2021

NHS digital pathology DICOM implementation

Everything Else

announcement , pacs , dicom , pathology

0

539

June 24, 2021

Which is the best digital pathology image analysis software program?

Fun Polls

software , image-analysis , open-source , pathology

0

350

May 21, 2021

HistoQC (Image Analysis)

Software

advanced-users , preprocessing , file-export , python , free , developers , image-analysis , open-source , quality-control , machine-learning , pathology , image-file , ai , command-line

0

382

April 29, 2021

Icy (Image Analysis)

Software

wsi , basic-users , python , java , free , linux-os , developers , image-analysis , advanced-users , gui , file-export , mac-os , open-source , javascript , pathology , windows-os , image-file

0

224

April 29, 2021

Orbit (Image Analysis)

Software

wsi , java , free , linux-os , developers , image-analysis , advanced-users , gui , file-export , mac-os , open-source , ai , pathology , windows-os , image-file

0

255

April 29, 2021

Cell profiler (Image Analysis)

Software

free , linux-os , developers , image-analysis , advanced-users , java , gui , file-export , mac-os , open-source , pathology , windows-os , image-file

0

205

April 29, 2021

QuPath (Image Analysis)

Software

free , linux-os , developers , image-analysis , advanced-users , java , gui , file-export , basic-users , mac-os , open-source , pathology , windows-os , image-file , ai , wsi

0

247

April 29, 2021

The Cancer Genome Atlas Uterine Corpus Endometrial Carcinoma data collection (65 subjects)

Images

uterus , pet , mri , ct , pathology , cancer , tcia , dataset

0

186

January 17, 2021

The Cancer Genome Atlas Thyroid Cancer data collection (6 subjects)

Images

pet , ct , thyroid , pathology , cancer , tcia , dataset