How to export registered images (CT-MR) to python?

How can I export registered MRI-CT images to use in python code for deep learning?

Can you give more information on the software that you are exporting from?

There are python libraries for handling different imaging file formats such as DICOM (pydicom) and NIFTI (nibabel) so it depends on what formats your system can export to and what your deep learning application is.

I am exporting from Eclipse (treatment planning system for radiation therapy) as DICOM but I convert it to NIFTI to use in python. Images are registered in Eclipse

1 Like
Category icons made by Freepik from